STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_01785Uncharacterized protein. (284 aa)    
Predicted Functional Partners:
TERG_07576
Rtt106 domain-containing protein.
    
   0.904
TERG_00181
Nucleolar protein 58.
   
 
 0.851
TERG_01796
RNA helicase.
   
  
 0.584
TERG_01447
Protein BCP1; Involved in nuclear export, actin cytoskeleton organization and vesicular transport; Belongs to the BCP1 family.
   
  
 0.564
TERG_04172
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 
 0.550
TERG_07175
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 
 0.549
TERG_05401
Uncharacterized protein.
   
 
 0.545
TERG_01698
G-patch domain-containing protein.
   
    0.531
TERG_03499
WD_REPEATS_REGION domain-containing protein.
   
   0.529
TERG_01331
Abhydrolase_2 domain-containing protein.
    
   0.507
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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