STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_03112Uncharacterized protein; Belongs to the AAA ATPase family. (502 aa)    
Predicted Functional Partners:
TERG_01370
Prohibitin.
   
 0.762
TERG_00244
PHB domain-containing protein.
   
 0.762
TERG_03289
Prohibitin.
   
 0.762
TERG_08446
PHB domain-containing protein.
   
 0.762
TERG_07735
Ribosomal protein L19.
  
 
 0.656
TERG_07837
Ribosomal protein S16.
  
 
 0.656
TERG_06577
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.643
TERG_02327
Uncharacterized protein.
  
   0.638
TERG_02858
Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.638
TERG_07337
Ribosomal_L2_C domain-containing protein.
   
 
 0.637
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.