STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_03957IPPc domain-containing protein. (438 aa)    
Predicted Functional Partners:
TERG_08493
Uncharacterized protein.
    
   0.809
TERG_06923
SAC domain-containing protein.
    
 0.781
TERG_01565
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.752
TERG_02500
PIPK domain-containing protein.
     
 0.746
TERG_01700
SAC domain-containing protein.
    
0.721
TERG_01705
Phosphatidylinositol kinase; Belongs to the PI3/PI4-kinase family.
     
 0.711
TERG_03576
PI3K/PI4K domain-containing protein.
     
 0.696
TERG_00390
AP-1 complex subunit gamma.
    
  0.670
TERG_05098
Kinase; Belongs to the inositol phosphokinase (IPK) family.
     
 0.668
TERG_06395
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
 0.653
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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