STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_04901Rab-GAP TBC domain-containing protein. (399 aa)    
Predicted Functional Partners:
TERG_04900
Protein YIP.
 
      0.885
TERG_06468
Uncharacterized protein.
    
 0.590
TERG_03263
Rab-GAP TBC domain-containing protein.
   
 
 0.531
TERG_00421
Rab-GAP TBC domain-containing protein.
    
 
 0.508
TERG_01225
Rab-GAP TBC domain-containing protein.
      
 0.487
TERG_04007
Uncharacterized protein.
      
 0.487
TERG_07308
Fe_hyd_lg_C domain-containing protein; Belongs to the NARF family.
   
  
 0.469
TERG_07163
Rab-GAP TBC domain-containing protein.
      
 0.450
TERG_04260
Uncharacterized protein.
      
 0.433
TERG_02500
PIPK domain-containing protein.
    
 
 0.432
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.