STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_05063Uncharacterized protein. (255 aa)    
Predicted Functional Partners:
TERG_04475
Uncharacterized protein.
    
 0.947
TERG_04993
Uridine kinase; Belongs to the uridine kinase family.
    
 0.947
TERG_05272
Uracil phosphoribosyltransferase.
    
 0.947
TERG_07186
Uncharacterized protein.
    
 0.930
TERG_04839
Developmental regulator flbA.
    
 0.860
TERG_07184
Uncharacterized protein.
    
 0.782
TERG_01511
Uncharacterized protein.
    
 0.758
TERG_01938
Uncharacterized protein.
    
 0.758
TERG_06825
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.754
TERG_06867
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.754
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.