TERG_07537 protein (Trichophyton rubrum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TERG_07537

Glucose-repressible alcohol dehydrogenase transcriptional effector. (604 aa)

Predicted Functional Partners:

TERG_00290

0.995

TERG_04000

0.995

TERG_08032

0.991

TERG_11512

0.989

TERG_02592

0.988

TERG_04836

0.988

TERG_02682

0.977

TERG_04838

0.953

TERG_00628

0.947

TERG_04758

0.947

Your Current Organism:

Trichophyton rubrum

NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TERG_00290	TERG_02592	F2SEX1	F2SI51	Uncharacterized protein.	Uncharacterized protein.	0.997
TERG_00290	TERG_02682	F2SEX1	F2SIP6	Uncharacterized protein.	ATP-dependent RNA helicase DHH1; Belongs to the DEAD box helicase family.	0.980
TERG_00290	TERG_04000	F2SEX1	F2SPK2	Uncharacterized protein.	Uncharacterized protein.	0.997
TERG_00290	TERG_04836	F2SEX1	F2SQH2	Uncharacterized protein.	NOT2_3_5 domain-containing protein.	0.998
TERG_00290	TERG_07537	F2SEX1	F2SY78	Uncharacterized protein.	Glucose-repressible alcohol dehydrogenase transcriptional effector.	0.995
TERG_00290	TERG_08032	F2SEX1	F2SYX0	Uncharacterized protein.	Cell differentiation protein rcd1.	0.998
TERG_00290	TERG_11512	F2SEX1	A0A087PFF9	Uncharacterized protein.	RRM_1 domain-containing protein.	0.998
TERG_00628	TERG_04838	F2SCH3	F2SQH4	Uncharacterized protein.	CDC73_C domain-containing protein.	0.999
TERG_00628	TERG_07537	F2SCH3	F2SY78	Uncharacterized protein.	Glucose-repressible alcohol dehydrogenase transcriptional effector.	0.947
TERG_02592	TERG_00290	F2SI51	F2SEX1	Uncharacterized protein.	Uncharacterized protein.	0.997
TERG_02592	TERG_02682	F2SI51	F2SIP6	Uncharacterized protein.	ATP-dependent RNA helicase DHH1; Belongs to the DEAD box helicase family.	0.952
TERG_02592	TERG_04000	F2SI51	F2SPK2	Uncharacterized protein.	Uncharacterized protein.	0.993
TERG_02592	TERG_04758	F2SI51	F2SQ93	Uncharacterized protein.	Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation.	0.869
TERG_02592	TERG_04836	F2SI51	F2SQH2	Uncharacterized protein.	NOT2_3_5 domain-containing protein.	0.997
TERG_02592	TERG_07537	F2SI51	F2SY78	Uncharacterized protein.	Glucose-repressible alcohol dehydrogenase transcriptional effector.	0.988
TERG_02592	TERG_08032	F2SI51	F2SYX0	Uncharacterized protein.	Cell differentiation protein rcd1.	0.997
TERG_02592	TERG_11512	F2SI51	A0A087PFF9	Uncharacterized protein.	RRM_1 domain-containing protein.	0.990
TERG_02682	TERG_00290	F2SIP6	F2SEX1	ATP-dependent RNA helicase DHH1; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.980
TERG_02682	TERG_02592	F2SIP6	F2SI51	ATP-dependent RNA helicase DHH1; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.952
TERG_02682	TERG_04000	F2SIP6	F2SPK2	ATP-dependent RNA helicase DHH1; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.980