STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_08128Uncharacterized protein. (198 aa)    
Predicted Functional Partners:
TERG_01792
RPA_C domain-containing protein.
   
 0.744
TERG_04692
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
 0.728
TERG_04518
Histone acetyltransferase type B subunit 2.
    
 0.690
TERG_00156
ERCC4 domain-containing protein.
   
  0.675
TERG_07476
ERCC4 domain-containing protein.
    
  0.622
TERG_01881
Uncharacterized protein.
    
 0.617
TERG_06150
Deoxyuridine 5'-triphosphate nucleotidohydrolase.
    
 0.617
TERG_06516
Uncharacterized protein.
    
 0.617
TERG_06200
Uncharacterized protein.
    
 0.614
TERG_04663
Uncharacterized protein.
    
 0.606
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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