STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_08317Uncharacterized protein. (667 aa)    
Predicted Functional Partners:
TERG_00139
MADS-box domain-containing protein.
    
 0.741
TERG_05229
Homeobox domain-containing protein.
    
 0.699
TERG_08692
GATA-type domain-containing protein.
    
 0.615
TERG_00863
GATA-type domain-containing protein.
    
 0.615
TERG_03577
Uncharacterized protein.
    
 0.615
TERG_03578
Nitrogen regulatory protein DAL80.
    
 0.615
TERG_04354
Uncharacterized protein.
    
 0.615
TERG_05075
Uncharacterized protein.
    
 0.615
TERG_08436
Uncharacterized protein.
    
 0.582
TERG_03613
TPK_B1_binding domain-containing protein.
    
  0.547
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.