STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_06059Uncharacterized protein. (1693 aa)    
Predicted Functional Partners:
TERG_04172
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.993
TERG_07175
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.993
TERG_04405
Histone H2A; Belongs to the histone H2A family.
    
 0.992
TERG_07586
Myb-like domain-containing protein.
   
 0.985
TERG_00674
Uncharacterized protein; Belongs to the actin family.
    
 0.984
TERG_04965
YL1_C domain-containing protein.
    
 0.984
TERG_03347
HIT-type domain-containing protein.
    
 
 0.978
TERG_05681
Uncharacterized protein; Belongs to the actin family.
    
 
 0.978
TERG_06411
Uncharacterized protein.
    
 0.978
TERG_06637
Actin.
    
 0.966
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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