STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A177D8L0Uncharacterized protein. (433 aa)    
Predicted Functional Partners:
AA0117_g4588
Ras-domain-containing protein.
   
 0.601
A0A177DES9
Tubulin-domain-containing protein; Belongs to the tubulin family.
    
 0.527
A0A177D7B2
Spindle pole body component.
    
 
 0.522
AA0117_g4659
Spindle pole body component.
    
 
 0.512
AA0117_g3990
Myosin-2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.508
AA0117_g5899
ARM repeat-containing protein.
   
 0.489
A0A177DGV6
Protein kinase domain-containing protein.
    
 
 0.441
AA0117_g149
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
   
 0.407
AA0117_g2070
Syntaxin-5.
    
 0.403
Your Current Organism:
Alternaria alternata
NCBI taxonomy Id: 5599
Other names: A. alternata, ATCC 66981 [[Alternaria tenuis]], Alternaria sp. AltIEIHBT, Alternaria sp. Ao34, Alternaria sp. Ao41, Alternaria sp. JZ017, Alternaria sp. M2-2, Alternaria sp. XJU-1, Alternaria tenuis, CBS 916.96 [[Alternaria tenuis]], EGS 34-016 [[Alternaria tenuis]], IMI 254138 [[Alternaria tenuis]], Torula alternata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.