STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AA0117_g738826S proteasome-like protein regulatory subunit. (334 aa)    
Predicted Functional Partners:
A0A177D2H6
Proteasome subunit beta.
   
 0.999
AA0117_g11066
26S protease regulatory subunit S10B; Belongs to the AAA ATPase family.
  
 0.999
AA0117_g10575
26S proteasome-like protein regulatory subunit.
   
0.999
A0A177D4F5
Proteasome endopeptidase complex; Belongs to the peptidase T1A family.
   
 0.999
AA0117_g10565
Proteasome subunit alpha type.
   
 0.999
AA0117_g3061
26S protease regulatory subunit 7; Belongs to the AAA ATPase family.
   
 0.999
A0A177DAM6
PCI domain-containing protein.
   
 0.999
AA0117_g1746
26S protease regulatory subunit; Belongs to the AAA ATPase family.
  
 0.999
AA0117_g4898
Putative 26S proteasome regulatory subunit.
   
 0.999
A0A177DF84
26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
   
 0.999
Your Current Organism:
Alternaria alternata
NCBI taxonomy Id: 5599
Other names: A. alternata, ATCC 66981 [[Alternaria tenuis]], Alternaria sp. AltIEIHBT, Alternaria sp. Ao34, Alternaria sp. Ao41, Alternaria sp. JZ017, Alternaria sp. M2-2, Alternaria sp. XJU-1, Alternaria tenuis, CBS 916.96 [[Alternaria tenuis]], EGS 34-016 [[Alternaria tenuis]], IMI 254138 [[Alternaria tenuis]], Torula alternata
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.