A0A177DLT1 protein (Alternaria alternata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A177DLT1

Uncharacterized protein. (344 aa)

Predicted Functional Partners:

AA0117_g11979

0.993

AA0117_g5195

0.824

A0A177D810

0.723

A0A177DEF6

0.698

AA0117_g709

0.693

A0A177DMQ1

0.595

AA0117_g2478

0.516

A0A177DM99

0.408

Your Current Organism:

Alternaria alternata

NCBI taxonomy Id: 5599
Other names: A. alternata, ATCC 66981 [[Alternaria tenuis]], Alternaria sp. AltIEIHBT, Alternaria sp. Ao34, Alternaria sp. Ao41, Alternaria sp. JZ017, Alternaria sp. M2-2, Alternaria sp. XJU-1, Alternaria tenuis, CBS 916.96 [[Alternaria tenuis]], EGS 34-016 [[Alternaria tenuis]], IMI 254138 [[Alternaria tenuis]], Torula alternata

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A177D810	A0A177DEF6	A0A177D810	A0A177DEF6	Uncharacterized protein.	DNA repair protein-like protein RAD57.	0.989
A0A177D810	A0A177DLT1	A0A177D810	A0A177DLT1	Uncharacterized protein.	Uncharacterized protein.	0.723
A0A177D810	A0A177DM99	A0A177D810	A0A177DM99	Uncharacterized protein.	Uncharacterized protein.	0.514
A0A177D810	A0A177DMQ1	A0A177D810	A0A177DMQ1	Uncharacterized protein.	Meiotic nuclear division protein 1; Required for proper homologous chromosome pairing and efficient cross-over and intragenic recombination during meiosis. Belongs to the MND1 family.	0.693
A0A177D810	AA0117_g11979	A0A177D810	A0A177D6B7	Uncharacterized protein.	Uncharacterized protein.	0.683
A0A177D810	AA0117_g2478	A0A177D810	A0A177DS48	Uncharacterized protein.	DNA topoisomerase IV, alpha subunit.	0.847
A0A177D810	AA0117_g709	A0A177D810	A0A177DVG1	Uncharacterized protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.990
A0A177DEF6	A0A177D810	A0A177DEF6	A0A177D810	DNA repair protein-like protein RAD57.	Uncharacterized protein.	0.989
A0A177DEF6	A0A177DLT1	A0A177DEF6	A0A177DLT1	DNA repair protein-like protein RAD57.	Uncharacterized protein.	0.698
A0A177DEF6	A0A177DM99	A0A177DEF6	A0A177DM99	DNA repair protein-like protein RAD57.	Uncharacterized protein.	0.409
A0A177DEF6	A0A177DMQ1	A0A177DEF6	A0A177DMQ1	DNA repair protein-like protein RAD57.	Meiotic nuclear division protein 1; Required for proper homologous chromosome pairing and efficient cross-over and intragenic recombination during meiosis. Belongs to the MND1 family.	0.409
A0A177DEF6	AA0117_g11979	A0A177DEF6	A0A177D6B7	DNA repair protein-like protein RAD57.	Uncharacterized protein.	0.476
A0A177DEF6	AA0117_g2478	A0A177DEF6	A0A177DS48	DNA repair protein-like protein RAD57.	DNA topoisomerase IV, alpha subunit.	0.759
A0A177DEF6	AA0117_g709	A0A177DEF6	A0A177DVG1	DNA repair protein-like protein RAD57.	P-loop containing nucleoside triphosphate hydrolase protein.	0.981
A0A177DLT1	A0A177D810	A0A177DLT1	A0A177D810	Uncharacterized protein.	Uncharacterized protein.	0.723
A0A177DLT1	A0A177DEF6	A0A177DLT1	A0A177DEF6	Uncharacterized protein.	DNA repair protein-like protein RAD57.	0.698
A0A177DLT1	A0A177DM99	A0A177DLT1	A0A177DM99	Uncharacterized protein.	Uncharacterized protein.	0.408
A0A177DLT1	A0A177DMQ1	A0A177DLT1	A0A177DMQ1	Uncharacterized protein.	Meiotic nuclear division protein 1; Required for proper homologous chromosome pairing and efficient cross-over and intragenic recombination during meiosis. Belongs to the MND1 family.	0.595
A0A177DLT1	AA0117_g11979	A0A177DLT1	A0A177D6B7	Uncharacterized protein.	Uncharacterized protein.	0.993
A0A177DLT1	AA0117_g2478	A0A177DLT1	A0A177DS48	Uncharacterized protein.	DNA topoisomerase IV, alpha subunit.	0.516

page 1 of 3

Server load: low (22%) [HD]

Permalink

Network

Fusion

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Neighborhood

© STRING Consortium 2024

Credits

Access

Info

About