STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A177E0C8Uncharacterized protein. (686 aa)    
Predicted Functional Partners:
A0A177DA45
NuA4-domain-containing protein.
    
 0.841
AA0117_g3873
Enhancer of polycomb-like protein.
   
 0.822
AA0117_g2568
Transcription-associated protein 1; Belongs to the PI3/PI4-kinase family.
   
 0.814
A0A177DEM8
SANT_DAMP1_like domain-containing protein.
   
 0.806
AA0117_g503
Actin/actin-like protein; Belongs to the actin family.
    
 0.773
A0A177DIR1
Yeats-domain-containing protein.
    
 0.767
AA0117_g10408
NuA4 histone acetyltransferase complex, Eaf3/MRG15 subunit.
   
 0.759
AA0117_g7806
Chromatin modification-related protein.
    
 0.719
A0A177D7K4
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.568
A0A177D7P9
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.568
Your Current Organism:
Alternaria alternata
NCBI taxonomy Id: 5599
Other names: A. alternata, ATCC 66981 [[Alternaria tenuis]], Alternaria sp. AltIEIHBT, Alternaria sp. Ao34, Alternaria sp. Ao41, Alternaria sp. JZ017, Alternaria sp. M2-2, Alternaria sp. XJU-1, Alternaria tenuis, CBS 916.96 [[Alternaria tenuis]], EGS 34-016 [[Alternaria tenuis]], IMI 254138 [[Alternaria tenuis]], Torula alternata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.