node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEE82808.1 | rpsB | SAMN04488561_2871 | SAMN04488561_0026 | Nucleoside-diphosphate-sugar epimerase. | SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. | 0.799 |
SEE82808.1 | rpsC | SAMN04488561_2871 | SAMN04488561_3723 | Nucleoside-diphosphate-sugar epimerase. | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.815 |
SEE82808.1 | rpsE | SAMN04488561_2871 | SAMN04488561_3712 | Nucleoside-diphosphate-sugar epimerase. | SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.806 |
SEE82808.1 | rpsH | SAMN04488561_2871 | SAMN04488561_3715 | Nucleoside-diphosphate-sugar epimerase. | SSU ribosomal protein S8P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. | 0.811 |
SEE82808.1 | rpsJ | SAMN04488561_2871 | SAMN04488561_3730 | Nucleoside-diphosphate-sugar epimerase. | SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.804 |
SEE82808.1 | rpsK | SAMN04488561_2871 | SAMN04488561_3702 | Nucleoside-diphosphate-sugar epimerase. | SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.798 |
SEE82808.1 | rpsL | SAMN04488561_2871 | SAMN04488561_3734 | Nucleoside-diphosphate-sugar epimerase. | SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.817 |
SEE82808.1 | rpsO | SAMN04488561_2871 | SAMN04488561_0309 | Nucleoside-diphosphate-sugar epimerase. | SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.804 |
SEE82808.1 | rpsQ | SAMN04488561_2871 | SAMN04488561_3720 | Nucleoside-diphosphate-sugar epimerase. | SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.817 |
SEE82808.1 | rpsS | SAMN04488561_2871 | SAMN04488561_3725 | Nucleoside-diphosphate-sugar epimerase. | SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. | 0.825 |
rpsB | SEE82808.1 | SAMN04488561_0026 | SAMN04488561_2871 | SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. | Nucleoside-diphosphate-sugar epimerase. | 0.799 |
rpsB | rpsC | SAMN04488561_0026 | SAMN04488561_3723 | SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.999 |
rpsB | rpsE | SAMN04488561_0026 | SAMN04488561_3712 | SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. | SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.999 |
rpsB | rpsH | SAMN04488561_0026 | SAMN04488561_3715 | SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. | SSU ribosomal protein S8P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. | 0.999 |
rpsB | rpsJ | SAMN04488561_0026 | SAMN04488561_3730 | SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. | SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.999 |
rpsB | rpsK | SAMN04488561_0026 | SAMN04488561_3702 | SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. | SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.999 |
rpsB | rpsL | SAMN04488561_0026 | SAMN04488561_3734 | SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. | SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.999 |
rpsB | rpsO | SAMN04488561_0026 | SAMN04488561_0309 | SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. | SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.999 |
rpsB | rpsQ | SAMN04488561_0026 | SAMN04488561_3720 | SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. | SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.999 |
rpsB | rpsS | SAMN04488561_0026 | SAMN04488561_3725 | SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. | SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. | 0.999 |