STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEF16009.1GntR family transcriptional regulator. (259 aa)    
Predicted Functional Partners:
SEF17359.1
Transcriptional regulator, GntR family.
  
     0.771
SEF14406.1
Transcriptional regulator, GntR family.
  
     0.702
SEF16007.1
Glutamine--fructose-6-phosphate transaminase.
       0.636
SEF16011.1
Transcriptional regulator, GntR family.
 
    
0.590
SEF16004.1
PTS system, glucose subfamily, IIA component.
    
 0.584
SEF16005.1
PTS system, N-acetylglucosamine-specific IIB component.
  
  
 0.564
SEF16002.1
Sugar-phosphatase.
  
    0.549
SEF18861.1
DNA-binding transcriptional regulator, FadR family.
  
    0.498
SEF15125.1
DNA-binding transcriptional regulator, FadR family.
  
    0.492
SEE87195.1
DNA-binding transcriptional regulator, FadR family.
  
    0.468
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.