STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEF16875.1Restriction system protein; Manually curated. (424 aa)    
Predicted Functional Partners:
SEF16877.1
T5orf172 domain-containing protein; Manually curated.
 
     0.954
SEE17120.1
Hypothetical protein.
  
     0.656
SEF16880.1
Helicase conserved C-terminal domain-containing protein.
       0.516
SEF17606.1
Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding.
  
     0.501
SEE30732.1
Protein of unknown function.
  
     0.447
SEF18931.1
D-specific alpha-keto acid dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
     0.447
SEF16757.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
     0.400
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.