STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEF18445.1Hypothetical protein. (687 aa)    
Predicted Functional Partners:
SEF18589.1
PTS system, mannose-specific IIC component.
   
 
 0.798
SEF18590.1
PTS system D-mannose-specific IID component, Man family.
   
 
 0.798
SEF18444.1
Hypothetical protein.
      
0.757
SEF18446.1
Alpha/beta hydrolase family protein.
      
0.709
SEF18447.1
Dihydrodipicolinate synthase/N-acetylneuraminate lyase; Belongs to the DapA family.
       0.709
SEE43608.1
Hypothetical protein.
   
 
  0.573
SEF16005.1
PTS system, N-acetylglucosamine-specific IIB component.
  
 
 0.552
SEF16013.1
PTS system, N-acetylglucosamine-specific IIC component.
  
 
 0.551
SEF08655.1
Alpha-1,6-glucosidases, pullulanase-type; Belongs to the glycosyl hydrolase 13 family.
  
 
 0.545
SEF18441.1
FAD/FMN-containing dehydrogenase.
       0.504
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.