STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACT06239.1TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA3049 histidine ABC transporter permease protein. (229 aa)    
Predicted Functional Partners:
ACT06241.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA3047 histidine/lysine/arginine/ornithine transporter subunit.
 
  
  0.984
ACT06238.1
KEGG: eca:ECA3050 histidine-binding periplasmic protein; TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; Belongs to the bacterial solute-binding protein 3 family.
  0.981
ACT06240.1
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA3048 histidine ABC transporter permease protein.
 
 
0.980
ACT06311.1
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: ent:Ent638_1970 extracellular solute-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
  0.956
ACT08146.1
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: eca:ECA0828 putative amino acid-binding periplasmic protein; Belongs to the bacterial solute-binding protein 3 family.
 
  0.956
ACT06123.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: kpe:KPK_3143 amino acid ABC transporter, ATP-binding protein.
 
  
 0.861
ACT07218.1
KEGG: eca:ECA2668 arginine-binding periplasmic protein 1; TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor.
   0.826
ACT07221.1
KEGG: eca:ECA2671 arginine-binding periplasmic protein 2; TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor.
   0.824
ACT06120.1
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: kpe:KPK_3146 amino acid ABC transporter, periplasmic amino acid-binding protein.
   0.790
ACT07820.1
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; KEGG: pfo:Pfl01_2802 extracellular solute-binding protein.
 
   0.778
Your Current Organism:
Dickeya chrysanthemi
NCBI taxonomy Id: 561229
Other names: D. chrysanthemi Ech1591, Dickeya chrysanthemi Ech1591, Dickeya dadantii Ech1591, Dickeya zeae Ech1591
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