STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACT08156.1PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: eca:ECA1459 putative sugar ABC transporter, periplasmic protein. (312 aa)    
Predicted Functional Partners:
ACT08154.1
PFAM: inner-membrane translocator; KEGG: eca:ECA1461 putative sugar ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 0.989
ACT08155.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cko:CKO_03989 hypothetical protein.
 
 0.982
rbsD
RbsD or FucU transport; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.884
ACT08969.1
PFAM: inner-membrane translocator; KEGG: eca:ECA0012 ribose ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.864
ACT08445.1
PFAM: inner-membrane translocator; KEGG: efe:EFER_2521 putative transport system permease for a carbohydrate-related molecule.
 
 0.863
ACT06990.1
PFAM: inner-membrane translocator; KEGG: eca:ECA2271 L-arabinose transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.854
ACT07257.1
PFAM: inner-membrane translocator; KEGG: eca:ECA2720 ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.849
ACT08589.1
Multi-sensor hybrid histidine kinase; KEGG: eca:ECA0314 aerobic respiration control sensor protein ArcB; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; Hpt domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; Hpt domain protein; PAS domain containing protein.
  
 
 0.845
ACT05692.1
Hpt sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; Hpt domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; Hpt domain protein; histidine kinase HAMP region domain protein; KEGG: eca:ECA3571 hybrid sensory histidine kinase BarA.
   
 
 0.842
ACT05841.1
PFAM: inner-membrane translocator; KEGG: kpe:KPK_5041 putative sugar ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.825
Your Current Organism:
Dickeya chrysanthemi
NCBI taxonomy Id: 561229
Other names: D. chrysanthemi Ech1591, Dickeya chrysanthemi Ech1591, Dickeya dadantii Ech1591, Dickeya zeae Ech1591
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