STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACT08968.1PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: eca:ECA0013 D-ribose transporter subunit RbsB. (296 aa)    
Predicted Functional Partners:
ACT08969.1
PFAM: inner-membrane translocator; KEGG: eca:ECA0012 ribose ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 0.994
rbsA
ABC transporter related; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.987
rbsD
RbsD or FucU transport; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.973
ACT05405.1
PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: eca:ECA3902 methyl-accepting chemotaxis protein.
     
  0.900
ACT06389.1
PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: eca:ECA1683 methyl-accepting chemotaxis protein.
     
  0.900
ACT08389.1
PFAM: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein; KEGG: eca:ECA1683 methyl-accepting chemotaxis protein.
     
  0.900
ACT08154.1
PFAM: inner-membrane translocator; KEGG: eca:ECA1461 putative sugar ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.876
ACT08445.1
PFAM: inner-membrane translocator; KEGG: efe:EFER_2521 putative transport system permease for a carbohydrate-related molecule.
 
 0.875
ACT06990.1
PFAM: inner-membrane translocator; KEGG: eca:ECA2271 L-arabinose transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.863
ACT07257.1
PFAM: inner-membrane translocator; KEGG: eca:ECA2720 ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.845
Your Current Organism:
Dickeya chrysanthemi
NCBI taxonomy Id: 561229
Other names: D. chrysanthemi Ech1591, Dickeya chrysanthemi Ech1591, Dickeya dadantii Ech1591, Dickeya zeae Ech1591
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