STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PC1_0012PFAM: glycoside hydrolase family 1; KEGG: eca:ECA4432 6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family. (480 aa)    
Predicted Functional Partners:
PC1_0010
PTS system, lactose/cellobiose family IIC subunit; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
  
 
 0.921
PC1_0009
PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: eca:ECA4435 pts system, IIB component.
  
 
 0.914
PC1_2352
Glucan 1,3-alpha-glucosidase; PFAM: glycoside hydrolase family 31; KEGG: eca:ECA1968 putative glycosyl hydrolase; Belongs to the glycosyl hydrolase 31 family.
  
 0.914
PC1_0011
PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; KEGG: eca:ECA4433 pts system, cellobiose-specific IIA component.
  
 
 0.912
PC1_0348
Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
   
 
 0.904
pgi
PFAM: phosphoglucose isomerase (PGI); KEGG: eca:ECA3979 glucose-6-phosphate isomerase; Belongs to the GPI family.
     
 0.904
PC1_1212
TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: eca:ECA1336 phosphoglucomutase.
     
  0.900
PC1_1964
PFAM: Aldose 1-epimerase; KEGG: eca:ECA2345 putative aldose 1-epimerase; Belongs to the glucose-6-phosphate 1-epimerase family.
     
 0.900
PC1_0028
PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: eca:ECA4409 PTS system, cellobiose-specific IIB component.
  
 
 0.780
PC1_3467
PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: eca:ECA3645 PTS system, lichenan-specific IIB component.
  
 
 0.780
Your Current Organism:
Pectobacterium carotovorum
NCBI taxonomy Id: 561230
Other names: P. carotovorum subsp. carotovorum PC1, Pectobacterium carotovorum subsp. carotovorum PC1, Pectobacterium carotovorum subsp. carotovorum str. PC1, Pectobacterium carotovorum subsp. carotovorum strain PC1
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