node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PC1_0423 | PC1_0424 | PC1_0423 | PC1_0424 | Transcriptional regulator, CopG family; PFAM: CopG domain protein DNA-binding domain protein; KEGG: shn:Shewana3_1797 CopG family transcriptional regulator. | KEGG: xfa:XF2074 hypothetical protein. | 0.987 |
PC1_0423 | rhaR | PC1_0423 | PC1_0422 | Transcriptional regulator, CopG family; PFAM: CopG domain protein DNA-binding domain protein; KEGG: shn:Shewana3_1797 CopG family transcriptional regulator. | Transcriptional regulator, AraC family; Activates expression of the rhaSR operon in response to L- rhamnose. | 0.588 |
PC1_0423 | rhaS | PC1_0423 | PC1_0421 | Transcriptional regulator, CopG family; PFAM: CopG domain protein DNA-binding domain protein; KEGG: shn:Shewana3_1797 CopG family transcriptional regulator. | Transcriptional regulator, AraC family; Activates expression of the rhaBAD and rhaT operons. | 0.531 |
PC1_0424 | PC1_0423 | PC1_0424 | PC1_0423 | KEGG: xfa:XF2074 hypothetical protein. | Transcriptional regulator, CopG family; PFAM: CopG domain protein DNA-binding domain protein; KEGG: shn:Shewana3_1797 CopG family transcriptional regulator. | 0.987 |
PC1_0424 | rhaR | PC1_0424 | PC1_0422 | KEGG: xfa:XF2074 hypothetical protein. | Transcriptional regulator, AraC family; Activates expression of the rhaSR operon in response to L- rhamnose. | 0.588 |
PC1_0424 | rhaS | PC1_0424 | PC1_0421 | KEGG: xfa:XF2074 hypothetical protein. | Transcriptional regulator, AraC family; Activates expression of the rhaBAD and rhaT operons. | 0.531 |
PC1_1393 | PC1_3921 | PC1_1393 | PC1_3921 | Transcriptional regulator, AraC family; PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: eca:ECA1518 AraC family transcription regulator. | Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pmy:Pmen_4575 transcriptional regulator. | 0.524 |
PC1_1393 | rhaR | PC1_1393 | PC1_0422 | Transcriptional regulator, AraC family; PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: eca:ECA1518 AraC family transcription regulator. | Transcriptional regulator, AraC family; Activates expression of the rhaSR operon in response to L- rhamnose. | 0.609 |
PC1_3921 | PC1_1393 | PC1_3921 | PC1_1393 | Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pmy:Pmen_4575 transcriptional regulator. | Transcriptional regulator, AraC family; PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: eca:ECA1518 AraC family transcription regulator. | 0.524 |
PC1_3921 | rhaR | PC1_3921 | PC1_0422 | Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pmy:Pmen_4575 transcriptional regulator. | Transcriptional regulator, AraC family; Activates expression of the rhaSR operon in response to L- rhamnose. | 0.647 |
PC1_3921 | rhaS | PC1_3921 | PC1_0421 | Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pmy:Pmen_4575 transcriptional regulator. | Transcriptional regulator, AraC family; Activates expression of the rhaBAD and rhaT operons. | 0.639 |
lldD | rhaR | PC1_4132 | PC1_0422 | FMN-dependent alpha-hydroxy acid dehydrogenase; Catalyzes the conversion of L-lactate to pyruvate. Is coupled to the respiratory chain; Belongs to the FMN-dependent alpha-hydroxy acid dehydrogenase family. | Transcriptional regulator, AraC family; Activates expression of the rhaSR operon in response to L- rhamnose. | 0.610 |
rhaA | rhaB | PC1_0419 | PC1_0420 | KEGG: eca:ECA0439 L-rhamnose isomerase; TIGRFAM: L-rhamnose isomerase; PFAM: L-rhamnose isomerase. | Rhamnulokinase; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1- hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate. Belongs to the rhamnulokinase family. | 0.999 |
rhaA | rhaM | PC1_0419 | PC1_0417 | KEGG: eca:ECA0439 L-rhamnose isomerase; TIGRFAM: L-rhamnose isomerase; PFAM: L-rhamnose isomerase. | L-rhamnose 1-epimerase; Involved in the anomeric conversion of L-rhamnose. | 0.996 |
rhaA | rhaR | PC1_0419 | PC1_0422 | KEGG: eca:ECA0439 L-rhamnose isomerase; TIGRFAM: L-rhamnose isomerase; PFAM: L-rhamnose isomerase. | Transcriptional regulator, AraC family; Activates expression of the rhaSR operon in response to L- rhamnose. | 0.672 |
rhaA | rhaS | PC1_0419 | PC1_0421 | KEGG: eca:ECA0439 L-rhamnose isomerase; TIGRFAM: L-rhamnose isomerase; PFAM: L-rhamnose isomerase. | Transcriptional regulator, AraC family; Activates expression of the rhaBAD and rhaT operons. | 0.417 |
rhaA | rhaT | PC1_0419 | PC1_0430 | KEGG: eca:ECA0439 L-rhamnose isomerase; TIGRFAM: L-rhamnose isomerase; PFAM: L-rhamnose isomerase. | RhaT l-rhamnose-proton symport 2; Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system). Belongs to the L-rhamnose transporter (TC 2.A.7.6) family. | 0.815 |
rhaB | rhaA | PC1_0420 | PC1_0419 | Rhamnulokinase; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1- hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate. Belongs to the rhamnulokinase family. | KEGG: eca:ECA0439 L-rhamnose isomerase; TIGRFAM: L-rhamnose isomerase; PFAM: L-rhamnose isomerase. | 0.999 |
rhaB | rhaM | PC1_0420 | PC1_0417 | Rhamnulokinase; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1- hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate. Belongs to the rhamnulokinase family. | L-rhamnose 1-epimerase; Involved in the anomeric conversion of L-rhamnose. | 0.980 |
rhaB | rhaR | PC1_0420 | PC1_0422 | Rhamnulokinase; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1- hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate. Belongs to the rhamnulokinase family. | Transcriptional regulator, AraC family; Activates expression of the rhaSR operon in response to L- rhamnose. | 0.751 |