STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PC1_2851General secretion pathway M protein; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (164 aa)    
Predicted Functional Partners:
PC1_2852
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 
 0.989
PC1_2854
TIGRFAM: general secretion pathway protein J; KEGG: eca:ECA3103 general secretion pathway protein J.
 
  
 0.960
PC1_2855
TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J; KEGG: eca:ECA3104 general secretion pathway protein I.
 
  
 0.959
PC1_2850
PFAM: type II secretion system protein N; KEGG: eca:ECA3099 general secretion pathway protein N.
 
   
 0.954
PC1_2856
TIGRFAM: general secretion pathway protein H; KEGG: eca:ECA3105 general secretion pathway protein H.
 
  
 0.949
PC1_2853
PFAM: General secretion pathway protein K; KEGG: eca:ECA3102 general secretion pathway protein K.
 
  
 0.942
PC1_2861
TIGRFAM: general secretion pathway protein C; KEGG: eca:ECA3110 general secretion pathway protein C.
 
   
 0.898
PC1_2860
TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: eca:ECA3109 general secretion pathway protein D.
 
  
 0.869
PC1_2857
TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: eca:ECA3106 general secretion pathway protein G.
 
  
 0.819
PC1_2858
TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: eca:ECA3107 general secretion pathway protein F.
 
  
 0.659
Your Current Organism:
Pectobacterium carotovorum
NCBI taxonomy Id: 561230
Other names: P. carotovorum subsp. carotovorum PC1, Pectobacterium carotovorum subsp. carotovorum PC1, Pectobacterium carotovorum subsp. carotovorum str. PC1, Pectobacterium carotovorum subsp. carotovorum strain PC1
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