STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gloBHydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. (251 aa)    
Predicted Functional Partners:
PC1_2384
Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
 
  
 0.973
PC1_2137
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: eca:ECA2168 hypothetical protein.
  
  
 0.917
PC1_1782
PFAM: beta-lactamase domain protein; KEGG: eca:ECA2544 putative metallo-beta-lactamase.
  
  
0.911
PC1_2294
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: eca:ECA2000 D-lactate dehydrogenase.
  
 0.908
PC1_3137
PFAM: Methyltransferase type 11; KEGG: eca:ECA3341 hypothetical protein.
     
 0.643
PC1_3139
PFAM: Lytic transglycosylase catalytic; MLTD_N domain protein; Peptidoglycan-binding LysM; SMART: Peptidoglycan-binding LysM; KEGG: eca:ECA3343 membrane-bound lytic murein transglycosylase D.
       0.627
PC1_0578
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein; KEGG: rso:RS05859 peptide synthetase protein; Belongs to the ATP-dependent AMP-binding enzyme family.
   
 
 0.573
PC1_2386
TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: eca:ECA1927 hypothetical protein; Belongs to the glutaredoxin family. Monothiol subfamily.
  
  
 0.503
Your Current Organism:
Pectobacterium carotovorum
NCBI taxonomy Id: 561230
Other names: P. carotovorum subsp. carotovorum PC1, Pectobacterium carotovorum subsp. carotovorum PC1, Pectobacterium carotovorum subsp. carotovorum str. PC1, Pectobacterium carotovorum subsp. carotovorum strain PC1
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