STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A6R68_06017Uncharacterized protein. (864 aa)    
Predicted Functional Partners:
A6R68_22246
Uncharacterized protein.
  
 
0.955
A6R68_16584
F-BAR domain-containing protein.
  
 
 
0.894
A6R68_16271
SH3 domain-containing protein.
    
  0.889
A6R68_18296
SH3 domain-containing protein.
    
 
0.889
A6R68_07177
Uncharacterized protein.
    
   0.756
A6R68_05109
Uncharacterized protein.
    
   0.756
A6R68_09948
Cobl domain-containing protein.
    
 
 0.752
A6R68_02353
Uncharacterized protein.
    
 
 0.752
A6R68_13722
Uncharacterized protein.
    
 
 0.752
A6R68_16964
MHD domain-containing protein.
     
 0.746
Your Current Organism:
Neotoma lepida
NCBI taxonomy Id: 56216
Other names: N. lepida, desert woodrat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.