STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBC2Ubiquitin-conjugating enzyme E2 2; Belongs to the ubiquitin-conjugating enzyme family. (165 aa)    
Predicted Functional Partners:
rhp18
Postreplication repair E3 ubiquitin-protein ligase rad18.
    
 0.994
leo1
RNA polymerase-associated protein LEO1.
    
 0.993
ptr3
Ubiquitin-activating enzyme E1 1.
   
 0.986
UBIQ
Ubiquitin.
    
 0.978
UFD4
Ubiquitin fusion degradation protein 4.
    
 0.970
A0H81_09999
Uncharacterized protein.
    
 0.963
rrn7
RNA polymerase I-specific transcription initiation factor rrn7.
    
 0.963
A0H81_09997
Uncharacterized protein.
   
 0.960
spm2
Ubiquitin-conjugating enzyme spm2.
   
 0.950
Rbx1
E3 ubiquitin-protein ligase RBX1.
    
 0.926
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.