STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gptPutative alanine aminotransferase, mitochondrial. (451 aa)    
Predicted Functional Partners:
TRPC
Multifunctional tryptophan biosynthesis protein.
    
 0.926
got2
Aspartate aminotransferase.
   
 0.923
AGX1
Alanine--glyoxylate aminotransferase 1.
  
 0.917
aat2
Aspartate aminotransferase.
   
 0.906
ARG5,6
Protein ARG5,6, mitochondrial; In the N-terminal section; belongs to the acetylglutamate kinase family.
  
 
 0.891
dld-1
Dihydrolipoyl dehydrogenase.
   
 0.888
SHM3
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 
 0.884
A0H81_02555
Putative aspartokinase.
 
 0.877
glt1
Putative glutamate synthase [NADPH].
    
 0.876
gdh-1
NAD-specific glutamate dehydrogenase.
  
 
 0.875
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.