STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dhh1ATP-dependent RNA helicase dhh1. (174 aa)    
Predicted Functional Partners:
A0H81_06068
DNA topoisomerase 2-associated protein pat1.
   
 0.985
lsm1
U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.
    
 0.983
lsm7
U6 snRNA-associated Sm-like protein LSm7.
    
 0.980
not1
General negative regulator of transcription subunit 1.
   
 0.979
A0H81_02320
Uncharacterized protein.
   
 0.977
Cnot7
CCR4-NOT transcription complex subunit 7.
   
 0.973
A0H81_04826
RING-type domain-containing protein.
    
 0.972
A0H81_08397
NAD(P)H-hydrate epimerase.
    
 0.965
A0H81_05199
Uncharacterized protein.
    
 0.965
Lsm2
U6 snRNA-associated Sm-like protein LSm2.
    
 0.954
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.