STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1024 aa)    
Predicted Functional Partners:
utp20
U3 small nucleolar RNA-associated protein 20.
   
 
 0.999
bms1
Ribosome biogenesis protein bms1.
   
 
 0.999
A0H81_13522
Uncharacterized protein.
   
 
 0.998
A0H81_12691
Periodic tryptophan protein 2.
   
 
 0.998
nop14
Putative nucleolar complex protein 14.
   
 
 0.998
BYSL
Bystin.
   
 
 0.998
NOP58
Nucleolar protein 58.
   
 
 0.998
UTP7
U3 small nucleolar RNA-associated protein 7.
   
 
 0.998
nol6
U3 small nucleolar RNA-associated protein 22.
   
 
 0.998
enp2
Ribosome biogenesis protein enp2.
   
 
 0.998
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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