STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssr2SWI/SNF and RSC complexes subunit ssr2. (692 aa)    
Predicted Functional Partners:
spp27
Upstream activation factor subunit spp27.
    
 0.996
A0H81_06717
Bromo domain-containing protein.
   
 0.992
Actl6a
Actin-like protein 6A; Belongs to the actin family.
    
 0.990
A0H81_07016
Uncharacterized protein.
   
 0.989
sfh1
Chromatin structure-remodeling complex subunit sfh1.
   
 0.986
rsc1
Chromatin structure-remodeling complex subunit rsc1.
   
 0.986
PBRM1
Protein polybromo-1.
   
 0.986
A0H81_13302
Uncharacterized protein.
   
 0.985
A0H81_13301
Uncharacterized protein.
   
 0.985
A0H81_10243
SnAC domain-containing protein.
   
 0.970
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.