STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PARP6Poly [ADP-ribose] polymerase 6. (1485 aa)    
Predicted Functional Partners:
ptr3
Ubiquitin-activating enzyme E1 1.
   
 0.815
UBC6
Ubiquitin-conjugating enzyme E2 6.
     
 0.795
UBC2
Ubiquitin-conjugating enzyme E2 2; Belongs to the ubiquitin-conjugating enzyme family.
     
 0.776
UBC1_0
Ubiquitin-conjugating enzyme E2 1; Belongs to the ubiquitin-conjugating enzyme family.
     
 0.771
UBC32
Ubiquitin-conjugating enzyme E2 32.
     
 0.763
ubc8
Ubiquitin-conjugating enzyme E2 8; Belongs to the ubiquitin-conjugating enzyme family.
   
 
 0.763
UBC1_1
Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.
     
 0.751
ubc7
Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.
     
 0.748
A0H81_05207
Ubiquitin-conjugating enzyme E2 S; Belongs to the ubiquitin-conjugating enzyme family.
   
 
 0.742
UBC12
NEDD8-conjugating enzyme UBC12; Belongs to the ubiquitin-conjugating enzyme family.
   
 
 0.742
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.