STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ubxn1UBX domain-containing protein 1. (1184 aa)    
Predicted Functional Partners:
png-1
Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase.
    
 0.990
UBX3
UBX domain-containing protein 3.
   
 0.985
cdc48
Cell division control protein 48.
    
 0.973
yjoB
Putative ATPase YjoB.
    
 0.973
afg2
ATPase family gene 2 protein.
    
 0.958
A0H81_07421
Putative AAA domain-containing protein C16E9.10c.
    
 0.927
ATAD3B_1
ATPase family AAA domain-containing protein 3B.
    
 0.923
A0H81_02955
Uncharacterized protein.
    
 0.923
A0H81_02954
AAA domain-containing protein.
    
 0.923
spoVK
Stage V sporulation protein K.
    
 0.923
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.