STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Frg1Protein FRG1. (287 aa)    
Predicted Functional Partners:
CWC22
Pre-mRNA-splicing factor CWC22.
   
   0.972
PRPF19
Pre-mRNA-processing factor 19.
    
   0.884
CDC40
Pre-mRNA-processing factor 17.
    
   0.879
EFTUD2
U5 small nuclear ribonucleoprotein component.
    
   0.862
cyp1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
   0.854
PRP46
Pre-mRNA-splicing factor PRP46.
    
   0.854
PPIE
Peptidyl-prolyl cis-trans isomerase E.
    
   0.854
CEF1
Pre-mRNA-splicing factor CEF1.
    
   0.852
smd2
Small nuclear ribonucleoprotein Sm D2.
    
   0.851
l(3)72Ab
Putative U5 small nuclear ribonucleoprotein helicase.
    
   0.848
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.