STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pi071Uncharacterized protein C27B12.07. (287 aa)    
Predicted Functional Partners:
tef5
Elongation factor 1-beta.
   
 0.910
TEF1
Elongation factor 1-alpha.
   
 0.797
elf1
mRNA export factor elf1.
   
 
 0.747
prs1
Putative proline--tRNA ligase C19C7.06.
   
 0.643
rpc40
DNA-directed RNA polymerases I and III subunit RPAC1.
   
 
 0.640
rpb3
DNA-directed RNA polymerase II subunit RPB3.
   
 
 0.640
yars
Tyrosine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.638
irs1
Isoleucine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.635
EEF1G
Elongation factor 1-gamma.
   
 0.635
qrs1
Putative glutamine--tRNA ligase.
   
 0.630
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.