STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MEP1Extracellular metalloprotease 1. (274 aa)    
Predicted Functional Partners:
gle1
Nucleoporin gle1.
    
  0.763
elf1
mRNA export factor elf1.
    
   0.719
ASF1
Histone chaperone ASF1.
    
 0.715
NSP1
Nucleoporin NSP1.
    
  0.677
RPS15
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
   0.622
RPS12
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
   0.613
rps14
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
   0.612
mrps5
Putative 37S ribosomal protein S5, mitochondrial; Belongs to the universal ribosomal protein uS5 family.
    
   0.607
RPS0
40S ribosomal protein S0.
    
   0.607
rps11a
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
   0.603
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.