STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ncb2Negative cofactor 2 complex subunit beta. (143 aa)    
Predicted Functional Partners:
A0H81_06925
Uncharacterized protein.
   
 
 0.992
tbpA
TATA-box-binding protein.
    
 
 0.986
A0H81_05926
N-acetyltransferase domain-containing protein.
    
 0.969
ADA2
Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation.
    
 0.964
A0H81_09236
Uncharacterized protein.
   
 0.963
sgf29
SAGA-associated factor 29.
    
 0.957
ngg1
Chromatin-remodeling complexes subunit ngg1.
    
 0.952
dpb4
DNA polymerase epsilon subunit D.
   
 
 0.946
A0H81_04814
Uncharacterized protein.
    
 
 0.935
A0H81_00294
BTB domain-containing protein.
    
 
 0.929
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.