STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vps26blVacuolar protein sorting-associated protein 26B-like protein. (297 aa)    
Predicted Functional Partners:
Vps35
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 0.990
VPS29
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
   
 0.981
SNX3
Sorting nexin-3.
    
 0.977
SNX1
Sorting nexin-1.
   
 
 0.945
vps17
Vacuolar protein sorting-associated protein 17.
    
 
 0.907
Tbc1d5
TBC1 domain family member 5.
   
 
 0.810
SNX4
Sorting nexin-4.
    
 
 0.794
SNX41
Sorting nexin-41.
   
 
 0.781
MVP1
Sorting nexin MVP1.
    
 
 0.768
VPS10
Sortilin; Functions as a sorting receptor in the Golgi compartment required for the intracellular sorting and delivery of soluble vacuolar proteins, like carboxypeptidase Y (CPY) and proteinase A.
    
 
 0.756
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.