STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl23a60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. (152 aa)    
Predicted Functional Partners:
RPL10
60S ribosomal protein L10.
  
 0.999
rpl4a
60S ribosomal protein L4-A.
  
 0.999
RPL37A
60S ribosomal protein L37-A.
   
 0.999
RPL33A
60S ribosomal protein L33-A.
   
 0.999
RPL12
60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.
  
 0.999
rps9b
40S ribosomal protein S9-B; Belongs to the universal ribosomal protein uS4 family.
  
 
 0.999
RPL21A
60S ribosomal protein L21-A.
   
 0.999
RPL28A
60S ribosomal protein L28-1.
   
 0.999
RL25
60S ribosomal protein L25; Belongs to the universal ribosomal protein uL23 family.
  
 0.999
RPS12
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
  
 0.999
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.