STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC12Guanine nucleotide-exchange factor SEC12. (418 aa)    
Predicted Functional Partners:
SAR1
Small COPII coat GTPase SAR1; Belongs to the small GTPase superfamily. SAR1 family.
   
 0.999
SEC23
Protein transport protein SEC23.
   
 0.890
SEY1
Protein SEY1; Cooperates with the reticulon proteins and tubule-shaping DP1 family proteins to generate and maintain the structure of the tubular endoplasmic reticulum network. Has GTPase activity, which is required for its function in ER organization; Belongs to the TRAFAC class dynamin-like GTPase superfamily. GB1/RHD3-type GTPase family. RHD3 subfamily.
    
   0.874
A0H81_09195
Uncharacterized protein.
    
   0.874
SEC24
Protein transport protein SEC24.
   
 
 0.842
SPBC4.03c
Uncharacterized protein C4.03c.
   
 0.831
sed5
Integral membrane protein sed5.
   
 
 0.808
A0H81_03826
VWFA domain-containing protein.
    
   0.806
A0H81_03825
Uncharacterized protein.
    
   0.806
A0H81_12495
Uncharacterized protein.
   
 0.799
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.