STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cheDCheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. (162 aa)    
Predicted Functional Partners:
Btus_1506
KEGG: gyc:GYMC61_2015 CheC, inhibitor of MCP methylation / FliN fusion protein; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; CheC domain protein.
 
 
 0.999
Btus_1519
CheC, inhibitor of MCP methylation; PFAM: CheC domain protein; KEGG: afl:Aflv_1715 chemotaxis protein phosphatase CheC.
 
 0.999
Btus_1516
CheB methylesterase; KEGG: aba:Acid345_1770 response regulator receiver modulated CheB methylesterase; PFAM: CheB methylesterase.
 
  
 0.991
Btus_1517
KEGG: gym:GYMC10_4167 CheA signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; P2 response regulator binding domain protein; Hpt domain protein; CheW domain protein; SMART: CheW domain protein; Hpt domain protein; ATP- binding region ATPase domain protein.
 
  
 0.991
Btus_1518
CheW protein; KEGG: bbe:BBR47_34580 chemotaxis protein CheW; PFAM: CheW domain protein; SMART: CheW domain protein.
 
  
 0.984
Btus_3015
KEGG: cce:Ccel_0221 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; CHASE3 domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein.
 
 0.984
Btus_0235
KEGG: dhd:Dhaf_2112 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein.
 
 0.980
Btus_0301
KEGG: gyc:GYMC61_1675 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein.
 
 0.980
Btus_2534
KEGG: lhk:LHK_00115 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer.
 
 0.980
Btus_2918
KEGG: bbe:BBR47_46660 putative methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; Cache type 2 domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein.
 
 0.980
Your Current Organism:
Kyrpidia tusciae
NCBI taxonomy Id: 562970
Other names: Bacillus tusciae DSM 2912, K. tusciae DSM 2912, Kyrpidia tusciae DSM 2912, Kyrpidia tusciae NBRC 15312, Kyrpidia tusciae str. DSM 2912, Kyrpidia tusciae strain DSM 2912
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