STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Btus_2133PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pfl:PFL_3018 enoyl-CoA hydratase. (262 aa)    
Predicted Functional Partners:
Btus_3276
KEGG: bbe:BBR47_54980 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein.
 
 0.937
Btus_2561
KEGG: chy:CHY_1740 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein.
 
 0.935
Btus_1244
KEGG: esi:Exig_0396 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein.
 
 0.912
Btus_2132
Transcriptional regulator, MerR family; KEGG: afu:AF0673 mercuric resistance operon regulatory protein (MerR); PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR.
       0.773
Btus_2134
PFAM: AMP-dependent synthetase and ligase; KEGG: rpa:RPA2146 putative long-chain-fatty-acid-- CoA ligase.
 
   0.683
Btus_1990
PFAM: Beta-ketoacyl synthase; KEGG: reu:Reut_C6295 thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.642
rpmG
KEGG: dau:Daud_0208 ribosomal protein L33; TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.
    
 
 0.620
rpsI
PFAM: ribosomal protein S9; KEGG: aac:Aaci_2679 ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
   0.604
rpsP
KEGG: gtn:GTNG_1050 30S ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.
    
   0.600
rpmJ
KEGG: bha:BH0159 50S ribosomal protein L36; TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.
    
   0.598
Your Current Organism:
Kyrpidia tusciae
NCBI taxonomy Id: 562970
Other names: Bacillus tusciae DSM 2912, K. tusciae DSM 2912, Kyrpidia tusciae DSM 2912, Kyrpidia tusciae NBRC 15312, Kyrpidia tusciae str. DSM 2912, Kyrpidia tusciae strain DSM 2912
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