STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Btus_3046PFAM: Enoyl-CoA hydratase/isomerase; KEGG: lsp:Bsph_2849 enoyl-CoA hydratase echA8; Belongs to the enoyl-CoA hydratase/isomerase family. (282 aa)    
Predicted Functional Partners:
Btus_3047
PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: tro:trd_1364 protein C7orf10; Belongs to the CoA-transferase III family.
 
 
 0.786
Btus_3048
PFAM: major facilitator superfamily MFS_1; KEGG: gka:GK2118 metabolite transporter.
       0.705
rpmG
KEGG: dau:Daud_0208 ribosomal protein L33; TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.
    
 
 0.613
rpsI
PFAM: ribosomal protein S9; KEGG: aac:Aaci_2679 ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
   0.604
rpsP
KEGG: gtn:GTNG_1050 30S ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.
    
   0.600
rpmJ
KEGG: bha:BH0159 50S ribosomal protein L36; TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.
    
   0.598
rpsE
Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
    
 
 0.596
rplQ
KEGG: gym:GYMC10_5719 ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17.
    
   0.596
rpsO
Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
    
 
 0.596
Btus_2664
KEGG: afl:Aflv_0280 signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein.
   
 
 0.593
Your Current Organism:
Kyrpidia tusciae
NCBI taxonomy Id: 562970
Other names: Bacillus tusciae DSM 2912, K. tusciae DSM 2912, Kyrpidia tusciae DSM 2912, Kyrpidia tusciae NBRC 15312, Kyrpidia tusciae str. DSM 2912, Kyrpidia tusciae strain DSM 2912
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