Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Btus_3051 | Btus_3053 | PFAM: peptidase S58 DmpA; KEGG: bbe:BBR47_25700 hypothetical protein. | KEGG: bbe:BBR47_25690 hypothetical protein. | 0.608 |
Btus_3051 | Btus_3054 | PFAM: peptidase S58 DmpA; KEGG: bbe:BBR47_25700 hypothetical protein. | PFAM: cobalt transport protein; KEGG: bbe:BBR47_25680 probable ABC transporter permease protein. | 0.405 |
Btus_3051 | Btus_3056 | PFAM: peptidase S58 DmpA; KEGG: bbe:BBR47_25700 hypothetical protein. | KEGG: gtn:GTNG_0290 hypothetical protein; TIGRFAM: acetylornithine deacetylase or succinyl- diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein. | 0.472 |
Btus_3053 | Btus_3051 | KEGG: bbe:BBR47_25690 hypothetical protein. | PFAM: peptidase S58 DmpA; KEGG: bbe:BBR47_25700 hypothetical protein. | 0.608 |
Btus_3053 | Btus_3054 | KEGG: bbe:BBR47_25690 hypothetical protein. | PFAM: cobalt transport protein; KEGG: bbe:BBR47_25680 probable ABC transporter permease protein. | 0.977 |
Btus_3053 | Btus_3056 | KEGG: bbe:BBR47_25690 hypothetical protein. | KEGG: gtn:GTNG_0290 hypothetical protein; TIGRFAM: acetylornithine deacetylase or succinyl- diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein. | 0.718 |
Btus_3054 | Btus_3051 | PFAM: cobalt transport protein; KEGG: bbe:BBR47_25680 probable ABC transporter permease protein. | PFAM: peptidase S58 DmpA; KEGG: bbe:BBR47_25700 hypothetical protein. | 0.405 |
Btus_3054 | Btus_3053 | PFAM: cobalt transport protein; KEGG: bbe:BBR47_25680 probable ABC transporter permease protein. | KEGG: bbe:BBR47_25690 hypothetical protein. | 0.977 |
Btus_3054 | Btus_3056 | PFAM: cobalt transport protein; KEGG: bbe:BBR47_25680 probable ABC transporter permease protein. | KEGG: gtn:GTNG_0290 hypothetical protein; TIGRFAM: acetylornithine deacetylase or succinyl- diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein. | 0.780 |
Btus_3056 | Btus_3051 | KEGG: gtn:GTNG_0290 hypothetical protein; TIGRFAM: acetylornithine deacetylase or succinyl- diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein. | PFAM: peptidase S58 DmpA; KEGG: bbe:BBR47_25700 hypothetical protein. | 0.472 |
Btus_3056 | Btus_3053 | KEGG: gtn:GTNG_0290 hypothetical protein; TIGRFAM: acetylornithine deacetylase or succinyl- diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein. | KEGG: bbe:BBR47_25690 hypothetical protein. | 0.718 |
Btus_3056 | Btus_3054 | KEGG: gtn:GTNG_0290 hypothetical protein; TIGRFAM: acetylornithine deacetylase or succinyl- diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein. | PFAM: cobalt transport protein; KEGG: bbe:BBR47_25680 probable ABC transporter permease protein. | 0.780 |