STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL25734.1Hypothetical protein. (283 aa)    
Predicted Functional Partners:
SDL25709.1
Cytochrome c.
  
  0.994
SDL75217.1
Cytochrome c.
 
  
  0.973
SDL23045.1
Cytochrome c.
 
  
  0.965
SDL54430.1
Cytochrome c.
  
  
 
0.754
SDM71571.1
Cytochrome c.
  
  
 
0.746
SDM98987.1
Trehalose utilisation.
  
     0.695
SDL25691.1
NUDIX domain-containing protein.
       0.548
SDL25772.1
Hypothetical protein.
       0.493
SDL25656.1
Hypothetical protein.
       0.459
SDM86871.1
Hypothetical protein.
  
     0.408
Your Current Organism:
Siphonobacter aquaeclarae
NCBI taxonomy Id: 563176
Other names: DSM 21668, Flexibacteraceae bacterium P2, NCAIM B 02328, S. aquaeclarae, Siphonobacter aquaeclarae Tancsics et al. 2010, strain P2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.