STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL27218.1Amino acid/polyamine/organocation transporter, APC superfamily. (474 aa)    
Predicted Functional Partners:
SDM43316.1
Por secretion system C-terminal sorting domain-containing protein.
    
 0.793
SDM28482.1
Alpha amylase, catalytic domain.
    
 0.788
SDM28508.1
Glycosidase; Belongs to the glycosyl hydrolase 13 family.
    
 0.788
glgE
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
    
 0.788
SDM82908.1
Glycosidase.
    
 0.788
SDL57807.1
PAS domain S-box-containing protein.
  
 
 0.693
nadE
NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.673
SDL27187.1
Protein of unknown function.
      0.622
SDL27160.1
Dipeptidyl aminopeptidase/acylaminoacyl peptidase.
       0.588
SDL27070.1
4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family.
       0.487
Your Current Organism:
Siphonobacter aquaeclarae
NCBI taxonomy Id: 563176
Other names: DSM 21668, Flexibacteraceae bacterium P2, NCAIM B 02328, S. aquaeclarae, Siphonobacter aquaeclarae Tancsics et al. 2010, strain P2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.