STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM68118.1Mannose-1-phosphate guanylyltransferase. (357 aa)    
Predicted Functional Partners:
gmd
GDPmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
 
 
 0.826
SDL58030.1
Phosphomannomutase.
 
 
 0.795
SDL52570.1
dTDP-glucose 4,6-dehydratase.
    
 0.686
SDL59040.1
Glucosamine-6-phosphate deaminase.
     
 0.659
SDL52592.1
UDP-glucose dehydrogenase.
  
 
 0.624
SDM67738.1
Capsular exopolysaccharide family.
 
 
 0.560
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.554
SDN06718.1
Nucleoside-diphosphate-sugar epimerase.
    
 0.553
SDM06324.1
UDP-glucose pyrophosphorylase.
    
 0.549
SDL84206.1
Glycosyltransferase involved in cell wall bisynthesis.
  
 
 0.537
Your Current Organism:
Siphonobacter aquaeclarae
NCBI taxonomy Id: 563176
Other names: DSM 21668, Flexibacteraceae bacterium P2, NCAIM B 02328, S. aquaeclarae, Siphonobacter aquaeclarae Tancsics et al. 2010, strain P2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.