STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM81669.14-hydroxy-2-oxoheptanedioate aldolase; Belongs to the HpcH/HpaI aldolase family. (268 aa)    
Predicted Functional Partners:
SDL84840.1
Altronate hydrolase.
 
  0.795
SDL83052.1
3-hydroxyisobutyrate dehydrogenase.
 
 
  0.641
SDM03137.1
Glycosyl hydrolase family 20, domain 2.
 
     0.586
SDM97560.1
Mannonate dehydratase.
 
 
 0.574
SDM10884.1
Starch-binding associating with outer membrane.
  
 
  0.550
SDM05282.1
L-ribulose 5-phosphate 4-epimerase.
  
 
  0.542
SDN06252.1
L-fuconate dehydratase.
 
 
 0.540
SDM81700.1
Outer membrane receptor for ferrienterochelin and colicins.
  
    0.530
SDL25948.1
Sugar phosphate isomerase/epimerase.
  
  
  0.520
SDM70925.1
L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
 
 0.514
Your Current Organism:
Siphonobacter aquaeclarae
NCBI taxonomy Id: 563176
Other names: DSM 21668, Flexibacteraceae bacterium P2, NCAIM B 02328, S. aquaeclarae, Siphonobacter aquaeclarae Tancsics et al. 2010, strain P2
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