STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV45544.1PFL2/glycerol dehydratase family glycyl radical enzyme. (830 aa)    
Predicted Functional Partners:
EFV45543.1
Glycyl-radical enzyme activating protein family.
 
 0.945
EFV43083.1
Glycyl-radical enzyme activating protein family.
 
  
 0.854
EFV45048.1
Glycyl-radical enzyme activating protein family.
 
  
 0.853
EFV44083.1
Glycyl-radical enzyme activating protein family.
 
  
 0.853
EFV45704.1
Glycyl-radical enzyme activating protein family.
 
  
 0.852
EFV46051.2
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
 0.803
EFV44560.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
 0.803
EFV44559.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
   
 
 0.712
EFV43471.1
Hypothetical protein.
   
 
 0.681
EFV45795.1
Proline dehydrogenase/delta 1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family.
  
 
 0.665
Your Current Organism:
Bilophila wadsworthia
NCBI taxonomy Id: 563192
Other names: B. wadsworthia 3_1_6, Bilophila wadsworthia 3_1_6, Bilophila wadsworthia str. 3_1_6, Bilophila wadsworthia strain 3_1_6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.