STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW77359.1Hypothetical protein. (80 aa)    
Predicted Functional Partners:
SDW77210.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
       0.737
SDW77246.1
Hypothetical protein.
       0.737
SDW77283.1
Hypothetical protein.
       0.737
SDW77318.1
Hypothetical protein.
       0.737
SDW77397.1
Uncharacterized conserved protein, UPF0335 family.
       0.495
SDW77435.1
Hypothetical protein.
       0.485
SDW77479.1
Hypothetical protein.
       0.485
SDW77158.1
Major Facilitator Superfamily protein.
       0.420
Your Current Organism:
Roseicitreum antarcticum
NCBI taxonomy Id: 564137
Other names: CGMCC 1.8894, LMG 24863, LMG:24863, R. antarcticum, Rhodobacter sp. ZS2-28, Roseicitreum antarcticum Yu et al. 2011, strain ZS2-28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.