STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2EXS0Uncharacterized protein. (684 aa)    
Predicted Functional Partners:
A0A1Y2FUP3
Uncharacterized protein.
   
 0.975
A0A1Y2EZF5
Pectin lyase fold/virulence factor; Belongs to the glycosyl hydrolase 28 family.
   
 0.861
A0A1Y2FI17
Pectin lyase fold/virulence factor; Belongs to the glycosyl hydrolase 28 family.
   
 0.861
A0A1Y2ESM1
Rac gtpase.
    
 0.829
A0A1Y2FIY7
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.829
A0A1Y2F1L9
Actin family.
    
 0.827
A0A1Y2F8W7
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 
 0.825
A0A1Y2FVH0
F-BAR domain-containing protein.
    
 0.805
A0A1Y2FIP0
SH3 domain-containing protein.
    
 0.801
A0A1Y2FLI0
DUF2013 domain-containing protein.
    
 
 0.779
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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